BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E04LP1|AL426531
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1617 0.0
>3x_Contig1795
Length = 38452
Score = 1617 bits (810), Expect = 0.0
Identities = 843/859 (98%), Gaps = 2/859 (0%)
Strand = Plus / Minus
Query: 1 agactggcaggctatgaaccttgatctcgagaattcgtatttagactgggagtccttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27744 agactggcaggctatgaaccttgatctcgagaattcgtatttagactgggagtccttgag 27685
Query: 61 ggaagcgacagattacggcttgaacattgtcaaattttggattgatactgtcgccattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27684 ggaagcgacagattacggcttgaacattgtcaaattttggattgatactgtcgccattgt 27625
Query: 121 gaaaaacgcggagaaaacctccataagaactccaatcttctcaataacatgtgtcttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27624 gaaaaacgcggagaaaacctccataagaactccaatcttctcaataacatgtgtcttttc 27565
Query: 181 tgcaattctcaccattgctgaatttttgaagagaatggagagaaaggctttgagctggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27564 tgcaattctcaccattgctgaatttttgaagagaatggagagaaaggctttgagctggaa 27505
Query: 241 acataatcaactgcgtagaacttcaagttcaacgacttcgttcatgaactatgttgacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27504 acataatcaactgcgtagaacttcaagttcaacgacttcgttcatgaactatgttgacag 27445
Query: 301 aactatttggctaaaatctgaaatgattttaaagaaggtggagacgcatcttctaccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27444 aactatttggctaaaatctgaaatgattttaaagaaggtggagacgcatcttctaccaaa 27385
Query: 361 aggctacaacatgcaatcatatgccgaatttttgagattacaggcaaacggkgctctaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 27384 aggctacaacatgcaatcatatgccgaatttttgagattacaggcaaacggtgctctaga 27325
Query: 421 cgttgaagtactagatgatgaackcgcgaa--gtgcaatggatccaaacacagatataaa 478
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 27324 cgttgaagtactagatgatgaactcgcgaagcgtgcaatggatccaaacacagatataaa 27265
Query: 479 tgamacgatgcaagttgttcaacaagctcgtctttcatcaagatccctatacctaggtgt 538
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27264 tgaaacgatgcaagttgttcaacaagctcgtctttcatcaagatccctatacctaggtgt 27205
Query: 539 cagaattctgggtgacgcccccatctggccaatcgctttattattcgcgcacgctctaca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27204 cagaattctgggtgacgcccccatctggccaatcgctttattattcgcgcacgctctaca 27145
Query: 599 agcgagagctatatacaacgtttcacatacttcacgttacgaattatgatgaaaacgccg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27144 agcgagagctatatacaacgtttcacatacttcacgttacgaattatgatgaaaacgccg 27085
Query: 659 cgaccgcattattccccatccccactwtwmaawaaaaaagmgtwacttcttcaggtcaaa 718
|||||||||||||||||||||||||| | | || | || ||||||||||||||||
Sbjct: 27084 cgaccgcattattccccatccccacttttcattgcaatcgcgttacttcttcaggtcaaa 27025
Query: 719 atgccatctaacttcatacaacagaaaattgatactaaaactgaaagaaatacaatactg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27024 atgccatctaacttcatacaacagaaaattgatactaaaactgaaagaaatacaatactg 26965
Query: 779 tactatagaatttttaatgacccccaaatgaccccgcgaccgctgccctttcagcatcaa 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26964 tactatagaatttttaatgacccccaaatgaccccgcgaccgctgccctttcagcatcaa 26905
Query: 839 atacaacatttttgacttc 857
|||||||||||||||||||
Sbjct: 26904 atacaacatttttgacttc 26886
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5910
Number of Sequences: 1807
Number of extensions: 5910
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)